HaHafeng
3446909ff7
Phase I - Session Blackboard + READ Layer: - SessionBlackboardService with Postgres-Only cache - DataProfileService for data overview generation - PicoInferenceService for LLM-driven PICO extraction - Frontend DataContextCard and VariableDictionaryPanel - E2E tests: 31/31 passed Phase II - Conversation Layer LLM + Intent Router: - ConversationService with SSE streaming - IntentRouterService (rule-first + LLM fallback, 6 intents) - SystemPromptService with 6-segment dynamic assembly - TokenTruncationService for context management - ChatHandlerService as unified chat entry - Frontend SSAChatPane and useSSAChat hook - E2E tests: 38/38 passed Phase III - Method Consultation + AskUser Standardization: - ToolRegistryService with Repository Pattern - MethodConsultService with DecisionTable + LLM enhancement - AskUserService with global interrupt handling - Frontend AskUserCard component - E2E tests: 13/13 passed Phase IV - Dialogue-Driven Analysis + QPER Integration: - ToolOrchestratorService (plan/execute/report) - analysis_plan SSE event for WorkflowPlan transmission - Dual-channel confirmation (ask_user card + workspace button) - PICO as optional hint for LLM parsing - E2E tests: 25/25 passed R Statistics Service: - 5 new R tools: anova_one, baseline_table, fisher, linear_reg, wilcoxon - Enhanced guardrails and block helpers - Comprehensive test suite (run_all_tools_test.js) Documentation: - Updated system status document (v5.9) - Updated SSA module status and development plan (v1.8) Total E2E: 107/107 passed (Phase I: 31, Phase II: 38, Phase III: 13, Phase IV: 25) Co-authored-by: Cursor <cursoragent@cursor.com>
70 lines
1.5 KiB
Docker
70 lines
1.5 KiB
Docker
FROM rocker/r-ver:4.3
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LABEL maintainer="dev-team@aiclinicalresearch.com"
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LABEL version="1.0.1"
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LABEL description="SSA-Pro R Statistics Service"
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# 安装系统依赖（包括 R 包编译所需的库）
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RUN apt-get update && apt-get install -y \
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libcurl4-openssl-dev \
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libssl-dev \
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libxml2-dev \
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libsodium-dev \
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zlib1g-dev \
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libnlopt-dev \
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liblapack-dev \
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libblas-dev \
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gfortran \
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pkg-config \
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cmake \
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curl \
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&& rm -rf /var/lib/apt/lists/*
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# 直接安装 R 包（简化方案，避免 renv 版本冲突）
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RUN R -e "install.packages(c( \
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'plumber', \
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'jsonlite', \
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'ggplot2', \
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'glue', \
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'dplyr', \
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'tidyr', \
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'base64enc', \
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'yaml', \
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'car', \
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'httr', \
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'scales', \
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'gridExtra', \
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'gtsummary', \
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'gt', \
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'broom' \
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), repos='https://cloud.r-project.org/', Ncpus=2)"
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# ===== 安全加固：创建非特权用户 =====
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RUN useradd -m -s /bin/bash appuser
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WORKDIR /app
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# 复制应用代码
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COPY plumber.R plumber.R
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COPY utils/ utils/
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COPY tools/ tools/
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COPY tests/ tests/
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# 设置目录权限
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RUN chown -R appuser:appuser /app
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# ===== 切换到非特权用户 =====
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USER appuser
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EXPOSE 8080
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# 环境变量
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ENV DEV_MODE="false"
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# 健康检查
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HEALTHCHECK --interval=30s --timeout=10s --start-period=5s --retries=3 \
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CMD curl -f http://localhost:8080/health || exit 1
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# 启动服务（不清理 /tmp，避免权限问题）
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CMD ["R", "-e", "plumber::plumb('plumber.R')$run(host='0.0.0.0', port=8080)"]
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