HaHafeng
dfc0fe0b9a
Summary: - Migrate PostgreSQL to pgvector/pgvector:pg15 Docker image - Successfully install and verify pgvector 0.8.1 extension - Create comprehensive Dify-to-pgvector migration plan - Update PKB module documentation with pgvector status - Update system documentation with pgvector integration Key changes: - docker-compose.yml: Switch to pgvector/pgvector:pg15 image - Add EkbDocument and EkbChunk data model design - Design R-C-R-G hybrid retrieval architecture - Add clinical data JSONB fields (pico, studyDesign, regimen, safety, criteria, endpoints) - Create detailed 10-day implementation roadmap Documentation updates: - PKB module status: pgvector RAG infrastructure ready - System status: pgvector 0.8.1 integrated - New: Dify replacement development plan (01-Dify替换为pgvector开发计划.md) - New: Enterprise medical knowledge base solution V2 Tested: PostgreSQL with pgvector verified, frontend and backend functionality confirmed
154 lines
3.4 KiB
YAML
154 lines
3.4 KiB
YAML
# REDCap Docker Compose 配置 - 生产环境
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# 版本：v1.0
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# 日期：2026-01-01
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# 用途：阿里云ECS生产环境或医院内网部署
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# 差异：移除phpMyAdmin，配置RDS MySQL，添加资源限制
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version: '3.8'
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services:
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# ========== REDCap Web服务 (Apache + PHP 8.1 + REDCap) ==========
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redcap-web:
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build:
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context: .
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dockerfile: Dockerfile.redcap
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container_name: redcap-apache
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restart: always
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ports:
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- "80:80"
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# 如需HTTPS，添加：
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# - "443:443"
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volumes:
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# REDCap源代码（只读）
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- ../redcap15.8.0/redcap:/var/www/html/redcap:ro
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# 配置文件
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- ./config/apache/redcap.conf:/etc/apache2/sites-available/000-default.conf:ro
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- ./config/php/php.ini:/usr/local/etc/php/php.ini:ro
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- ./config/database.php:/var/www/html/redcap/database.php:ro
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# SSL证书（如需HTTPS）
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# - ./ssl/cert.pem:/etc/ssl/certs/redcap.crt:ro
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# - ./ssl/key.pem:/etc/ssl/private/redcap.key:ro
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# 持久化数据（可读写）
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- redcap-edocs:/var/www/html/redcap/edocs
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- redcap-modules:/var/www/html/redcap/modules
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- redcap-temp:/var/www/html/redcap/temp
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environment:
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# 数据库连接信息（使用RDS）
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# 注意：生产环境应从环境变量读取，不要写死在配置文件中
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REDCAP_DB_HOST: ${REDCAP_DB_HOST} # RDS内网地址，如：rm-xxx.mysql.rds.aliyuncs.com
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REDCAP_DB_PORT: ${REDCAP_DB_PORT:-3306}
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REDCAP_DB_NAME: ${MYSQL_DATABASE}
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REDCAP_DB_USER: ${MYSQL_USER}
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REDCAP_DB_PASS: ${MYSQL_PASSWORD}
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# PHP配置
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TZ: Asia/Shanghai
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networks:
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- redcap-network
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deploy:
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resources:
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limits:
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cpus: '2'
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memory: 4G
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reservations:
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cpus: '1'
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memory: 2G
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logging:
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driver: "json-file"
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options:
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max-size: "10m"
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max-file: "3"
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healthcheck:
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test: ["CMD", "curl", "-f", "http://localhost/"]
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interval: 30s
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timeout: 10s
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retries: 3
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# ========== MySQL 容器（可选，如不使用RDS） ==========
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# 注意：生产环境强烈推荐使用阿里云RDS MySQL
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# 如需使用Docker MySQL，取消下方注释：
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#
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# redcap-db:
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# image: mysql:8.0
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# container_name: redcap-mysql
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# restart: always
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# environment:
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# MYSQL_ROOT_PASSWORD: ${MYSQL_ROOT_PASSWORD}
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# MYSQL_DATABASE: ${MYSQL_DATABASE}
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# MYSQL_USER: ${MYSQL_USER}
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# MYSQL_PASSWORD: ${MYSQL_PASSWORD}
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# volumes:
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# - redcap-db-data:/var/lib/mysql
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# ports:
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# - "3306:3306"
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# networks:
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# - redcap-network
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# command: --default-authentication-plugin=mysql_native_password
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# deploy:
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# resources:
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# limits:
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# cpus: '1'
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# memory: 2G
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# reservations:
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# cpus: '0.5'
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# memory: 1G
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# ========== 网络配置 ==========
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networks:
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redcap-network:
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driver: bridge
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name: redcap-network
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# ========== 数据卷配置 ==========
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volumes:
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# MySQL数据（如使用Docker MySQL）
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# redcap-db-data:
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# name: redcap-db-data
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# driver: local
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# REDCap上传文件（持久化）
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redcap-edocs:
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name: redcap-edocs
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driver: local
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# External Modules（持久化）
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redcap-modules:
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name: redcap-modules
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driver: local
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# 临时文件（可定期清理）
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redcap-temp:
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name: redcap-temp
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driver: local
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