AIclinicalresearch/backend/prisma/migrations/manual_fulltext_screening.sql

-- =====================================================
-- 全文复筛数据库迁移脚本（手动执行）
-- Schema: asl_schema
-- 日期: 2025-11-23
-- 说明: 只操作asl_schema，不影响其他schema
-- =====================================================

-- 1. 修改 literatures 表，添加全文复筛相关字段
ALTER TABLE asl_schema.literatures
  ADD COLUMN IF NOT EXISTS stage TEXT DEFAULT 'imported',
  ADD COLUMN IF NOT EXISTS has_pdf BOOLEAN DEFAULT false,
  ADD COLUMN IF NOT EXISTS pdf_storage_type TEXT,
  ADD COLUMN IF NOT EXISTS pdf_storage_ref TEXT,
  ADD COLUMN IF NOT EXISTS pdf_status TEXT DEFAULT 'pending',
  ADD COLUMN IF NOT EXISTS pdf_uploaded_at TIMESTAMP(3),
  ADD COLUMN IF NOT EXISTS full_text_storage_type TEXT,
  ADD COLUMN IF NOT EXISTS full_text_storage_ref TEXT,
  ADD COLUMN IF NOT EXISTS full_text_url TEXT,
  ADD COLUMN IF NOT EXISTS full_text_format TEXT,
  ADD COLUMN IF NOT EXISTS full_text_source TEXT,
  ADD COLUMN IF NOT EXISTS full_text_token_count INTEGER,
  ADD COLUMN IF NOT EXISTS full_text_extracted_at TIMESTAMP(3);

-- 添加索引
CREATE INDEX IF NOT EXISTS idx_literatures_stage ON asl_schema.literatures(stage);
CREATE INDEX IF NOT EXISTS idx_literatures_has_pdf ON asl_schema.literatures(has_pdf);
CREATE INDEX IF NOT EXISTS idx_literatures_pdf_status ON asl_schema.literatures(pdf_status);

-- 2. 创建 fulltext_screening_tasks 表
CREATE TABLE IF NOT EXISTS asl_schema.fulltext_screening_tasks (
  id TEXT PRIMARY KEY,
  project_id TEXT NOT NULL,
  model_a TEXT NOT NULL,
  model_b TEXT NOT NULL,
  prompt_version TEXT,
  status TEXT NOT NULL DEFAULT 'pending',
  total_count INTEGER NOT NULL DEFAULT 0,
  processed_count INTEGER NOT NULL DEFAULT 0,
  success_count INTEGER NOT NULL DEFAULT 0,
  failed_count INTEGER NOT NULL DEFAULT 0,
  degraded_count INTEGER NOT NULL DEFAULT 0,
  total_tokens INTEGER DEFAULT 0,
  total_cost DOUBLE PRECISION DEFAULT 0,
  started_at TIMESTAMP(3),
  completed_at TIMESTAMP(3),
  estimated_end_at TIMESTAMP(3),
  error_message TEXT,
  error_stack TEXT,
  created_at TIMESTAMP(3) NOT NULL DEFAULT CURRENT_TIMESTAMP,
  updated_at TIMESTAMP(3) NOT NULL DEFAULT CURRENT_TIMESTAMP,
  CONSTRAINT fk_fulltext_task_project FOREIGN KEY (project_id) 
    REFERENCES asl_schema.screening_projects(id) ON DELETE CASCADE
);

-- 添加索引
CREATE INDEX IF NOT EXISTS idx_fulltext_tasks_project_id ON asl_schema.fulltext_screening_tasks(project_id);
CREATE INDEX IF NOT EXISTS idx_fulltext_tasks_status ON asl_schema.fulltext_screening_tasks(status);
CREATE INDEX IF NOT EXISTS idx_fulltext_tasks_created_at ON asl_schema.fulltext_screening_tasks(created_at);

-- 3. 创建 fulltext_screening_results 表
CREATE TABLE IF NOT EXISTS asl_schema.fulltext_screening_results (
  id TEXT PRIMARY KEY,
  task_id TEXT NOT NULL,
  project_id TEXT NOT NULL,
  literature_id TEXT NOT NULL,
  
  -- Model A (DeepSeek-V3) 结果
  model_a_name TEXT,
  model_a_status TEXT,
  model_a_fields JSONB,
  model_a_overall JSONB,
  model_a_processing_log JSONB,
  model_a_verification JSONB,
  model_a_tokens INTEGER,
  model_a_cost DOUBLE PRECISION,
  model_a_error TEXT,
  
  -- Model B (Qwen-Max) 结果
  model_b_name TEXT,
  model_b_status TEXT,
  model_b_fields JSONB,
  model_b_overall JSONB,
  model_b_processing_log JSONB,
  model_b_verification JSONB,
  model_b_tokens INTEGER,
  model_b_cost DOUBLE PRECISION,
  model_b_error TEXT,
  
  -- 验证结果
  medical_logic_issues JSONB,
  evidence_chain_issues JSONB,
  
  -- 冲突检测
  is_conflict BOOLEAN DEFAULT false,
  conflict_severity TEXT,
  conflict_fields TEXT[],
  conflict_details JSONB,
  review_priority INTEGER DEFAULT 50,
  review_deadline TIMESTAMP(3),
  
  -- 人工复核
  final_decision TEXT,
  final_decision_by TEXT,
  final_decision_at TIMESTAMP(3),
  exclusion_reason TEXT,
  review_notes TEXT,
  
  -- 处理状态
  processing_status TEXT DEFAULT 'pending',
  is_degraded BOOLEAN DEFAULT false,
  degraded_model TEXT,
  
  -- 元数据
  processed_at TIMESTAMP(3),
  prompt_version TEXT,
  raw_output_a JSONB,
  raw_output_b JSONB,
  created_at TIMESTAMP(3) NOT NULL DEFAULT CURRENT_TIMESTAMP,
  updated_at TIMESTAMP(3) NOT NULL DEFAULT CURRENT_TIMESTAMP,
  
  CONSTRAINT fk_fulltext_result_task FOREIGN KEY (task_id) 
    REFERENCES asl_schema.fulltext_screening_tasks(id) ON DELETE CASCADE,
  CONSTRAINT fk_fulltext_result_project FOREIGN KEY (project_id) 
    REFERENCES asl_schema.screening_projects(id) ON DELETE CASCADE,
  CONSTRAINT fk_fulltext_result_literature FOREIGN KEY (literature_id) 
    REFERENCES asl_schema.literatures(id) ON DELETE CASCADE,
  CONSTRAINT unique_project_literature_fulltext UNIQUE (project_id, literature_id)
);

-- 添加索引
CREATE INDEX IF NOT EXISTS idx_fulltext_results_task_id ON asl_schema.fulltext_screening_results(task_id);
CREATE INDEX IF NOT EXISTS idx_fulltext_results_project_id ON asl_schema.fulltext_screening_results(project_id);
CREATE INDEX IF NOT EXISTS idx_fulltext_results_literature_id ON asl_schema.fulltext_screening_results(literature_id);
CREATE INDEX IF NOT EXISTS idx_fulltext_results_is_conflict ON asl_schema.fulltext_screening_results(is_conflict);
CREATE INDEX IF NOT EXISTS idx_fulltext_results_final_decision ON asl_schema.fulltext_screening_results(final_decision);
CREATE INDEX IF NOT EXISTS idx_fulltext_results_review_priority ON asl_schema.fulltext_screening_results(review_priority);

-- 完成
SELECT 'Migration completed successfully!' AS status;