Commit Graph

66 Commits

Author SHA1 Message Date
f729699510 feat(dc): Complete Tool C quick action buttons Phase 1-2 - 7 functions
Summary:
- Implement 7 quick action functions (filter, recode, binning, conditional, dropna, compute, pivot)
- Refactor to pre-written Python functions architecture (stable and secure)
- Add 7 Python operations modules with full type hints
- Add 7 frontend Dialog components with user-friendly UI
- Fix NaN serialization issues and auto type conversion
- Update all related documentation

Technical Details:
- Python: operations/ module (filter.py, recode.py, binning.py, conditional.py, dropna.py, compute.py, pivot.py)
- Backend: QuickActionService.ts with 7 execute methods
- Frontend: 7 Dialog components with complete validation
- Toolbar: Enable 7 quick action buttons

Status: Phase 1-2 completed, basic testing passed, ready for further testing
2025-12-08 17:38:08 +08:00
f01981bf78 feat(dc/tool-c): 完成AI代码生成服务(Day 3 MVP)
核心功能:
- 新增AICodeService(550行):AI代码生成核心服务
- 新增AIController(257行):4个API端点
- 新增dc_tool_c_ai_history表:存储对话历史
- 实现自我修正机制:最多3次智能重试
- 集成LLMFactory:复用通用能力层
- 10个Few-shot示例:覆盖Level 1-4场景

技术优化:
- 修复NaN序列化问题(Python端转None)
- 修复数据传递问题(从Session获取真实数据)
- 优化System Prompt(明确环境信息)
- 调整Few-shot示例(移除import语句)

测试结果:
- 通过率:9/11(81.8%) 达到MVP标准
- 成功场景:缺失值处理、编码、分箱、BMI、筛选、填补、统计、分类
- 待优化:数值清洗、智能去重(已记录技术债务TD-C-006)

API端点:
- POST /api/v1/dc/tool-c/ai/generate(生成代码)
- POST /api/v1/dc/tool-c/ai/execute(执行代码)
- POST /api/v1/dc/tool-c/ai/process(生成并执行,一步到位)
- GET /api/v1/dc/tool-c/ai/history/:sessionId(对话历史)

文档更新:
- 新增Day 3开发完成总结(770行)
- 新增复杂场景优化技术债务(TD-C-006)
- 更新工具C当前状态文档
- 更新技术债务清单

影响范围:
- backend/src/modules/dc/tool-c/*(新增2个文件,更新1个文件)
- backend/scripts/create-tool-c-ai-history-table.mjs(新增)
- backend/prisma/schema.prisma(新增DcToolCAiHistory模型)
- extraction_service/services/dc_executor.py(NaN序列化修复)
- docs/03-业务模块/DC-数据清洗整理/*(5份文档更新)

Breaking Changes: 无

总代码行数:+950行

Refs: #Tool-C-Day3
2025-12-07 16:21:32 +08:00
2348234013 feat(dc/tool-c): Day 2 - Session管理与数据处理完成
核心功能:
- 数据库: 创建dc_tool_c_sessions表 (12字段, 3索引)
- 服务层: SessionService (383行), DataProcessService (303行)
- 控制器: SessionController (300行, 6个API端点)
- 路由: 新增6个Session管理路由
- 测试: 7个API测试全部通过 (100%)

技术亮点:
- 零落盘架构: Excel内存解析, OSS存储
- Session管理: 10分钟过期, 心跳延长机制
- 云原生规范: storage/logger/prisma全平台复用
- 完整测试: 上传/预览/完整数据/删除/心跳

文件清单:
- backend/prisma/schema.prisma (新增DcToolCSession模型)
- backend/prisma/migrations/create_tool_c_session.sql
- backend/scripts/create-tool-c-table.mjs
- backend/src/modules/dc/tool-c/services/ (SessionService, DataProcessService)
- backend/src/modules/dc/tool-c/controllers/SessionController.ts
- backend/src/modules/dc/tool-c/routes/index.ts
- backend/test-tool-c-day2.mjs
- docs/03-业务模块/DC-数据清洗整理/00-工具C当前状态与开发指南.md
- docs/03-业务模块/DC-数据清洗整理/06-开发记录/2025-12-06_工具C_Day2开发完成总结.md

代码统计: ~1900行
测试结果: 7/7 通过 (100%)
云原生规范: 完全符合
2025-12-06 22:12:47 +08:00
d4d33528c7 feat(dc): Complete Phase 1 - Portal workbench page development
Summary:
- Implement DC module Portal page with 3 tool cards
- Create ToolCard component with decorative background and hover animations
- Implement TaskList component with table layout and progress bars
- Implement AssetLibrary component with tab switching and file cards
- Complete database verification (4 tables confirmed)
- Complete backend API verification (6 endpoints ready)
- Optimize UI to match prototype design (V2.html)

Frontend Components (~715 lines):
- components/ToolCard.tsx - Tool cards with animations
- components/TaskList.tsx - Recent tasks table view
- components/AssetLibrary.tsx - Data asset library with tabs
- hooks/useRecentTasks.ts - Task state management
- hooks/useAssets.ts - Asset state management
- pages/Portal.tsx - Main portal page
- types/portal.ts - TypeScript type definitions

Backend Verification:
- Backend API: 1495 lines code verified
- Database: dc_schema with 4 tables verified
- API endpoints: 6 endpoints tested (templates API works)

Documentation:
- Database verification report
- Backend API test report
- Phase 1 completion summary
- UI optimization report
- Development task checklist
- Development plan for Tool B

Status: Phase 1 completed (100%), ready for browser testing
Next: Phase 2 - Tool B Step 1 and 2 development
2025-12-02 21:53:24 +08:00
88cc049fb3 feat(asl): Complete Day 5 - Fulltext Screening Backend API Development
- Implement 5 core API endpoints (create task, get progress, get results, update decision, export Excel)
- Add FulltextScreeningController with Zod validation (652 lines)
- Implement ExcelExporter service with 4-sheet report generation (352 lines)
- Register routes under /api/v1/asl/fulltext-screening
- Create 31 REST Client test cases
- Add automated integration test script
- Fix PDF extraction fallback mechanism in LLM12FieldsService
- Update API design documentation to v3.0
- Update development plan to v1.2
- Create Day 5 development record
- Clean up temporary test files
2025-11-23 10:52:07 +08:00
beb7f7f559 feat(asl): Implement full-text screening core LLM service and validation system (Day 1-3)
Core Components:
- PDFStorageService with Dify/OSS adapters
- LLM12FieldsService with Nougat-first + dual-model + 3-layer JSON parsing
- PromptBuilder for dynamic prompt assembly
- MedicalLogicValidator with 5 rules + fault tolerance
- EvidenceChainValidator for citation integrity
- ConflictDetectionService for dual-model comparison

Prompt Engineering:
- System Prompt (6601 chars, Section-Aware strategy)
- User Prompt template (PICOS context injection)
- JSON Schema (12 fields constraints)
- Cochrane standards (not loaded in MVP)

Key Innovations:
- 3-layer JSON parsing (JSON.parse + json-repair + code block extraction)
- Promise.allSettled for dual-model fault tolerance
- safeGetFieldValue for robust field extraction
- Mixed CN/EN token calculation

Integration Tests:
- integration-test.ts (full test)
- quick-test.ts (quick test)
- cached-result-test.ts (fault tolerance test)

Documentation Updates:
- Development record (Day 2-3 summary)
- Quality assurance strategy (full-text screening)
- Development plan (progress update)
- Module status (v1.1 update)
- Technical debt (10 new items)

Test Results:
- JSON parsing success rate: 100%
- Medical logic validation: 5/5 passed
- Dual-model parallel processing: OK
- Cost per PDF: CNY 0.10

Files: 238 changed, 14383 insertions(+), 32 deletions(-)
Docs: docs/03-涓氬姟妯″潡/ASL-AI鏅鸿兘鏂囩尞/05-寮€鍙戣褰?2025-11-22_Day2-Day3_LLM鏈嶅姟涓庨獙璇佺郴缁熷紑鍙?md
2025-11-22 22:21:12 +08:00
8eef9e0544 feat(asl): Complete Week 4 - Results display and Excel export with hybrid solution
Features:
- Backend statistics API (cloud-native Prisma aggregation)
- Results page with hybrid solution (AI consensus + human final decision)
- Excel export (frontend generation, zero disk write, cloud-native)
- PRISMA-style exclusion reason analysis with bar chart
- Batch selection and export (3 export methods)
- Fixed logic contradiction (inclusion does not show exclusion reason)
- Optimized table width (870px, no horizontal scroll)

Components:
- Backend: screeningController.ts - add getProjectStatistics API
- Frontend: ScreeningResults.tsx - complete results page (hybrid solution)
- Frontend: excelExport.ts - Excel export utility (40 columns full info)
- Frontend: ScreeningWorkbench.tsx - add navigation button
- Utils: get-test-projects.mjs - quick test tool

Architecture:
- Cloud-native: backend aggregation reduces network transfer
- Cloud-native: frontend Excel generation (zero file persistence)
- Reuse platform: global prisma instance, logger
- Performance: statistics API < 500ms, Excel export < 3s (1000 records)

Documentation:
- Update module status guide (add Week 4 features)
- Update task breakdown (mark Week 4 completed)
- Update API design spec (add statistics API)
- Update database design (add field usage notes)
- Create Week 4 development plan
- Create Week 4 completion report
- Create technical debt list

Test:
- End-to-end flow test passed
- All features verified
- Performance test passed
- Cloud-native compliance verified

Ref: Week 4 Development Plan
Scope: ASL Module MVP - Title Abstract Screening Results
Cloud-Native: Backend aggregation + Frontend Excel generation
2025-11-21 20:12:38 +08:00
2e8699c217 feat(asl): Week 2 Day 2 - Excel import with template download and intelligent dedup
Features:
- feat: Excel template generation and download (with examples)
- feat: Excel file parsing in memory (cloud-native, no disk write)
- feat: Field validation (title + abstract required)
- feat: Smart deduplication (DOI priority + Title fallback)
- feat: Literature preview table with statistics
- feat: Complete submission flow (create project + import literatures)

Components:
- feat: Create excelUtils.ts with full Excel processing toolkit
- feat: Enhance TitleScreeningSettings page with upload/preview/submit
- feat: Update API interface signatures and export unified aslApi object

Dependencies:
- chore: Add xlsx library for Excel file processing

Ref: Week 2 Frontend Development - Day 2
Scope: ASL Module MVP - Title Abstract Screening
Cloud-Native: Memory parsing, no file persistence
2025-11-19 10:24:47 +08:00
3634933ece refactor(asl): ASL frontend architecture refactoring with left navigation
- feat: Create ASLLayout component with 7-module left navigation
- feat: Implement Title Screening Settings page with optimized PICOS layout
- feat: Add placeholder pages for Workbench and Results
- fix: Fix nested routing structure for React Router v6
- fix: Resolve Spin component warning in MainLayout
- fix: Add QueryClientProvider to App.tsx
- style: Optimize PICOS form layout (P+I left, C+O+S right)
- style: Align Inclusion/Exclusion criteria side-by-side
- docs: Add architecture refactoring and routing fix reports

Ref: Week 2 Frontend Development
Scope: ASL module MVP - Title Abstract Screening
2025-11-18 21:51:51 +08:00
e3e7e028e8 feat(platform): Complete platform infrastructure implementation and verification
Platform Infrastructure - 8 Core Modules Completed:
- Storage Service (LocalAdapter + OSSAdapter stub)
- Logging System (Winston + JSON format)
- Cache Service (MemoryCache + Redis stub)
- Async Job Queue (MemoryQueue + DatabaseQueue stub)
- Health Check Endpoints (liveness/readiness/detailed)
- Database Connection Pool (with Serverless optimization)
- Environment Configuration Management
- Monitoring Metrics (DB connections/memory/API)

Key Features:
- Adapter Pattern for zero-code environment switching
- Full backward compatibility with legacy modules
- 100% test coverage (all 8 modules verified)
- Complete documentation (11 docs updated)

Technical Improvements:
- Fixed duplicate /health route registration issue
- Fixed TypeScript interface export (export type)
- Installed winston dependency
- Added structured logging with context support
- Implemented graceful shutdown for Serverless
- Added connection pool optimization for SAE

Documentation Updates:
- Platform infrastructure planning (04-骞冲彴鍩虹璁炬柦瑙勫垝.md)
- Implementation report (2025-11-17-骞冲彴鍩虹璁炬柦瀹炴柦瀹屾垚鎶ュ憡.md)
- Verification report (2025-11-17-骞冲彴鍩虹璁炬柦楠岃瘉鎶ュ憡.md)
- Git commit guidelines (06-Git鎻愪氦瑙勮寖.md) - Added commit frequency rules
- Updated 3 core architecture documents

Code Statistics:
- New code: 2,532 lines
- New files: 22
- Updated files: 130+
- Test pass rate: 100% (8/8 modules)

Deployment Readiness:
- Local environment: 鉁?Ready
- Cloud environment: 馃攧 Needs OSS/Redis dependencies

Next Steps:
- Ready to start ASL module development
- Can directly use storage/logger/cache/jobQueue

Tested: Local verification 100% passed
Related: #Platform-Infrastructure
2025-11-18 08:00:41 +08:00
5579ffa78e feat(backend): add batch processing and review tasks modules
- Add Prisma migrations for batch processing tables
- Add Prisma migrations for review tasks tables
- Add seed data for testing
- Add prompt templates for review (editorial, methodology)
- Add CloseAI configuration guide
- Add database validation scripts
2025-11-16 15:43:04 +08:00
0c5310fb77 refactor(backend): incremental architecture evolution (Task 19)
- Add common/ layer for shared capabilities (LLM, RAG, document, middleware)
- Add legacy/ layer for existing business code
- Move files to new structure (controllers, routes, services)
- Update index.ts for new route registration
- System remains fully functional
2025-11-16 15:42:44 +08:00
AI Clinical Dev Team
348af7fee9 feat: add general chat feature (without project/agent concept) 2025-10-12 09:48:49 +08:00
AI Clinical Dev Team
8afff23995 docs: Day 12-13 completion summary and milestone update 2025-10-10 20:33:18 +08:00
AI Clinical Dev Team
b72167f73e feat: Day 8-9 - Project Management API completed
Backend:
- Create project routes (GET, POST, PUT, DELETE)
- Implement projectController with CRUD operations
- Create projectService for database operations
- Add validation middleware for request validation
- Update Prisma schema (add background, researchType, deletedAt fields)
- Implement soft delete for projects

Frontend:
- Create projectApi service module
- Update useProjectStore with fetchProjects and loading state
- Connect ProjectSelector to real API with loading indicator
- Connect CreateProjectDialog to real API with error handling
- Connect EditProjectDialog to real API with loading state
- Add comprehensive error handling and user feedback

Build: Both frontend and backend build successfully
2025-10-10 19:38:49 +08:00
AI Clinical Dev Team
39e14cfb97 feat(backend): Day 5 - backend basic architecture setup completed 2025-10-10 15:56:45 +08:00