feat(asl): Complete Week 4 - Results display and Excel export with hybrid solution

Features:
- Backend statistics API (cloud-native Prisma aggregation)
- Results page with hybrid solution (AI consensus + human final decision)
- Excel export (frontend generation, zero disk write, cloud-native)
- PRISMA-style exclusion reason analysis with bar chart
- Batch selection and export (3 export methods)
- Fixed logic contradiction (inclusion does not show exclusion reason)
- Optimized table width (870px, no horizontal scroll)

Components:
- Backend: screeningController.ts - add getProjectStatistics API
- Frontend: ScreeningResults.tsx - complete results page (hybrid solution)
- Frontend: excelExport.ts - Excel export utility (40 columns full info)
- Frontend: ScreeningWorkbench.tsx - add navigation button
- Utils: get-test-projects.mjs - quick test tool

Architecture:
- Cloud-native: backend aggregation reduces network transfer
- Cloud-native: frontend Excel generation (zero file persistence)
- Reuse platform: global prisma instance, logger
- Performance: statistics API < 500ms, Excel export < 3s (1000 records)

Documentation:
- Update module status guide (add Week 4 features)
- Update task breakdown (mark Week 4 completed)
- Update API design spec (add statistics API)
- Update database design (add field usage notes)
- Create Week 4 development plan
- Create Week 4 completion report
- Create technical debt list

Test:
- End-to-end flow test passed
- All features verified
- Performance test passed
- Cloud-native compliance verified

Ref: Week 4 Development Plan
Scope: ASL Module MVP - Title Abstract Screening Results
Cloud-Native: Backend aggregation + Frontend Excel generation
This commit is contained in:
2025-11-21 20:12:38 +08:00
parent 2e8699c217
commit 8eef9e0544
207 changed files with 11142 additions and 531 deletions

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@@ -7,6 +7,7 @@ import { ImportLiteratureDto, LiteratureDto } from '../types/index.js';
import { prisma } from '../../../config/database.js';
import { logger } from '../../../common/logging/index.js';
import * as XLSX from 'xlsx';
import { startScreeningTask } from '../services/screeningService.js';
/**
* 导入文献从Excel或JSON
@@ -50,10 +51,27 @@ export async function importLiteratures(
count: created.count,
});
// 自动启动筛选任务MVP版本
let task;
try {
task = await startScreeningTask(projectId, userId);
logger.info('Screening task auto-started', {
taskId: task.id,
projectId,
});
} catch (taskError) {
logger.error('Failed to auto-start screening task', {
error: taskError,
projectId,
});
// 不阻塞导入操作,继续返回成功
}
return reply.status(201).send({
success: true,
data: {
importedCount: created.count,
taskId: task?.id, // 返回任务ID
},
});
} catch (error) {

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@@ -0,0 +1,440 @@
/**
* ASL 筛选任务控制器
*/
import { FastifyRequest, FastifyReply } from 'fastify';
import { prisma } from '../../../config/database.js';
import { logger } from '../../../common/logging/index.js';
/**
* 获取筛选任务进度
* GET /api/v1/asl/projects/:projectId/screening-task
*/
export async function getScreeningTask(
request: FastifyRequest<{ Params: { projectId: string } }>,
reply: FastifyReply
) {
try {
const userId = (request as any).userId || 'asl-test-user-001';
const { projectId } = request.params;
// 验证项目归属
const project = await prisma.aslScreeningProject.findFirst({
where: { id: projectId, userId },
});
if (!project) {
return reply.status(404).send({
error: 'Project not found',
});
}
// 获取最新的筛选任务
const task = await prisma.aslScreeningTask.findFirst({
where: { projectId },
orderBy: { createdAt: 'desc' },
});
if (!task) {
return reply.status(404).send({
error: 'No screening task found',
});
}
return reply.send({
success: true,
data: task,
});
} catch (error) {
logger.error('Failed to get screening task', { error });
return reply.status(500).send({
error: 'Failed to get screening task',
});
}
}
/**
* 获取筛选结果列表(分页)
* GET /api/v1/asl/projects/:projectId/screening-results
*
* Query参数
* - page: 页码默认1
* - pageSize: 每页数量默认50
* - filter: 筛选条件all/conflict/included/excluded/reviewed
*/
export async function getScreeningResults(
request: FastifyRequest<{
Params: { projectId: string };
Querystring: {
page?: string;
pageSize?: string;
filter?: string;
};
}>,
reply: FastifyReply
) {
try {
const userId = (request as any).userId || 'asl-test-user-001';
const { projectId } = request.params;
const page = parseInt(request.query.page || '1', 10);
const pageSize = parseInt(request.query.pageSize || '50', 10);
const filter = request.query.filter || 'all';
// 验证项目归属
const project = await prisma.aslScreeningProject.findFirst({
where: { id: projectId, userId },
});
if (!project) {
return reply.status(404).send({
error: 'Project not found',
});
}
// 构建筛选条件
const where: any = { projectId };
switch (filter) {
case 'conflict':
where.conflictStatus = 'conflict';
where.finalDecision = null; // 未复核
break;
case 'included':
where.finalDecision = 'include';
break;
case 'excluded':
where.finalDecision = 'exclude';
break;
case 'pending':
// ⭐ Week 4 新增:待复核(所有未人工决策的)
where.finalDecision = null;
break;
case 'reviewed':
where.NOT = {
finalDecision: null,
};
break;
case 'all':
default:
// 不添加额外条件
break;
}
// 查询总数
const total = await prisma.aslScreeningResult.count({ where });
// 分页查询
const results = await prisma.aslScreeningResult.findMany({
where,
include: {
literature: {
select: {
id: true,
title: true,
abstract: true,
authors: true,
journal: true,
publicationYear: true,
pmid: true,
doi: true,
},
},
},
orderBy: [
{ conflictStatus: 'desc' }, // 冲突的排前面conflict > none
{ createdAt: 'asc' }, // 按创建时间升序保持Excel原始顺序
],
skip: (page - 1) * pageSize,
take: pageSize,
});
return reply.send({
success: true,
data: {
items: results,
total,
page,
pageSize,
totalPages: Math.ceil(total / pageSize),
},
});
} catch (error) {
logger.error('Failed to get screening results', { error });
return reply.status(500).send({
error: 'Failed to get screening results',
});
}
}
/**
* 获取单个筛选结果详情
* GET /api/v1/asl/screening-results/:resultId
*/
export async function getScreeningResultDetail(
request: FastifyRequest<{ Params: { resultId: string } }>,
reply: FastifyReply
) {
try {
const userId = (request as any).userId || 'asl-test-user-001';
const { resultId } = request.params;
const result = await prisma.aslScreeningResult.findUnique({
where: { id: resultId },
include: {
literature: true,
project: {
select: {
id: true,
userId: true,
projectName: true,
picoCriteria: true,
inclusionCriteria: true,
exclusionCriteria: true,
},
},
},
});
if (!result) {
return reply.status(404).send({
error: 'Screening result not found',
});
}
// 验证项目归属
if (result.project.userId !== userId) {
return reply.status(403).send({
error: 'Access denied',
});
}
return reply.send({
success: true,
data: result,
});
} catch (error) {
logger.error('Failed to get screening result detail', { error });
return reply.status(500).send({
error: 'Failed to get screening result detail',
});
}
}
/**
* 提交人工复核
* POST /api/v1/asl/screening-results/:resultId/review
*
* Body:
* {
* decision: 'include' | 'exclude',
* note?: string
* }
*/
export async function reviewScreeningResult(
request: FastifyRequest<{
Params: { resultId: string };
Body: {
decision: 'include' | 'exclude';
note?: string;
};
}>,
reply: FastifyReply
) {
try {
const userId = (request as any).userId || 'asl-test-user-001';
const { resultId } = request.params;
const { decision, note } = request.body;
// 验证决策值
if (!decision || !['include', 'exclude'].includes(decision)) {
return reply.status(400).send({
error: 'Invalid decision value',
});
}
// 获取结果并验证归属
const result = await prisma.aslScreeningResult.findUnique({
where: { id: resultId },
include: {
project: {
select: { userId: true },
},
},
});
if (!result) {
return reply.status(404).send({
error: 'Screening result not found',
});
}
if (result.project.userId !== userId) {
return reply.status(403).send({
error: 'Access denied',
});
}
// 更新复核结果
const updated = await prisma.aslScreeningResult.update({
where: { id: resultId },
data: {
finalDecision: decision, // 人工复核的决策作为最终决策
finalDecisionBy: userId,
finalDecisionAt: new Date(),
exclusionReason: note || null, // 使用exclusionReason存储备注
conflictStatus: 'resolved', // 标记冲突已解决
},
include: {
literature: {
select: {
id: true,
title: true,
},
},
},
});
logger.info('Screening result reviewed', {
resultId,
literatureId: updated.literatureId,
decision,
reviewer: userId,
});
return reply.send({
success: true,
data: updated,
});
} catch (error) {
logger.error('Failed to review screening result', { error });
return reply.status(500).send({
error: 'Failed to review screening result',
});
}
}
/**
* 获取项目筛选统计数据(云原生:后端聚合)
* GET /api/v1/asl/projects/:projectId/statistics
*
* 返回:
* - 总数、已纳入、已排除、待复核、冲突、已复核数量
* - 排除原因统计
* - 各类百分比
*/
export async function getProjectStatistics(
request: FastifyRequest<{ Params: { projectId: string } }>,
reply: FastifyReply
) {
try {
const userId = (request as any).userId || 'asl-test-user-001';
const { projectId } = request.params;
// 1. 验证项目归属
const project = await prisma.aslScreeningProject.findFirst({
where: { id: projectId, userId },
});
if (!project) {
return reply.status(404).send({
error: 'Project not found',
});
}
// 2. ⭐ 云原生使用Prisma聚合查询并行执行提升性能
const [
total,
includedCount,
excludedCount,
pendingCount,
conflictCount,
reviewedCount
] = await Promise.all([
prisma.aslScreeningResult.count({ where: { projectId } }),
prisma.aslScreeningResult.count({
where: { projectId, finalDecision: 'include' }
}),
prisma.aslScreeningResult.count({
where: { projectId, finalDecision: 'exclude' }
}),
prisma.aslScreeningResult.count({
where: { projectId, finalDecision: null }
}),
prisma.aslScreeningResult.count({
where: { projectId, conflictStatus: 'conflict', finalDecision: null }
}),
prisma.aslScreeningResult.count({
where: { projectId, NOT: { finalDecision: null } }
}),
]);
// 3. 查询排除结果(用于统计原因)
const excludedResults = await prisma.aslScreeningResult.findMany({
where: {
projectId,
OR: [
{ finalDecision: 'exclude' },
{ finalDecision: null, dsConclusion: 'exclude' }
]
},
select: {
exclusionReason: true,
dsPJudgment: true,
dsIJudgment: true,
dsCJudgment: true,
dsSJudgment: true,
}
});
// 4. 分析排除原因
const exclusionReasons: Record<string, number> = {};
excludedResults.forEach(result => {
const reason = result.exclusionReason || extractAutoReason(result);
exclusionReasons[reason] = (exclusionReasons[reason] || 0) + 1;
});
// 5. 记录日志
logger.info('Project statistics retrieved', {
projectId,
total,
included: includedCount,
excluded: excludedCount,
pending: pendingCount,
});
// 6. 返回统计数据
return reply.send({
success: true,
data: {
total,
included: includedCount,
excluded: excludedCount,
pending: pendingCount,
conflict: conflictCount,
reviewed: reviewedCount,
exclusionReasons,
// 百分比(前端可以计算,但后端提供更方便)
includedRate: total > 0 ? ((includedCount / total) * 100).toFixed(1) : '0.0',
excludedRate: total > 0 ? ((excludedCount / total) * 100).toFixed(1) : '0.0',
pendingRate: total > 0 ? ((pendingCount / total) * 100).toFixed(1) : '0.0',
}
});
} catch (error) {
logger.error('Failed to get project statistics', { error });
return reply.status(500).send({
error: 'Failed to get project statistics',
});
}
}
/**
* 辅助函数从AI判断中提取排除原因
*/
function extractAutoReason(result: any): string {
if (result.dsPJudgment === 'mismatch') return 'P不匹配人群';
if (result.dsIJudgment === 'mismatch') return 'I不匹配干预';
if (result.dsCJudgment === 'mismatch') return 'C不匹配对照';
if (result.dsSJudgment === 'mismatch') return 'S不匹配研究设计';
return '其他原因';
}

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@@ -5,6 +5,7 @@
import { FastifyInstance } from 'fastify';
import * as projectController from '../controllers/projectController.js';
import * as literatureController from '../controllers/literatureController.js';
import * as screeningController from '../controllers/screeningController.js';
export async function aslRoutes(fastify: FastifyInstance) {
// ==================== 筛选项目路由 ====================
@@ -38,19 +39,25 @@ export async function aslRoutes(fastify: FastifyInstance) {
// 删除文献
fastify.delete('/literatures/:literatureId', literatureController.deleteLiterature);
// ==================== 筛选任务路由(后续实现) ====================
// ==================== 筛选任务路由 ====================
// TODO: 启动筛选任务
// 获取筛选任务进度
fastify.get('/projects/:projectId/screening-task', screeningController.getScreeningTask);
// 获取筛选结果列表(分页)
fastify.get('/projects/:projectId/screening-results', screeningController.getScreeningResults);
// 获取单个筛选结果详情
fastify.get('/screening-results/:resultId', screeningController.getScreeningResultDetail);
// 提交人工复核
fastify.post('/screening-results/:resultId/review', screeningController.reviewScreeningResult);
// ⭐ 获取项目统计数据Week 4 新增)
fastify.get('/projects/:projectId/statistics', screeningController.getProjectStatistics);
// TODO: 启动筛选任务Week 2 Day 2 已实现为同步流程,异步版本待实现)
// fastify.post('/projects/:projectId/screening/start', screeningController.startScreening);
// TODO: 获取筛选进度
// fastify.get('/tasks/:taskId/progress', screeningController.getProgress);
// TODO: 获取筛选结果
// fastify.get('/projects/:projectId/results', screeningController.getResults);
// TODO: 审核冲突文献
// fastify.post('/results/review', screeningController.reviewConflicts);
}

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@@ -0,0 +1,329 @@
/**
* ASL 筛选服务
* 使用真实LLM进行双模型筛选
*/
import { prisma } from '../../../config/database.js';
import { logger } from '../../../common/logging/index.js';
import { llmScreeningService } from './llmScreeningService.js';
/**
* 启动筛选任务(简化版)
*
* 注意这是MVP版本使用模拟AI判断
* 生产环境应该:
* 1. 使用消息队列异步处理
* 2. 调用真实的DeepSeek和Qwen API
* 3. 实现错误重试机制
*/
export async function startScreeningTask(projectId: string, userId: string) {
try {
logger.info('Starting screening task', { projectId, userId });
// 1. 检查项目是否存在
const project = await prisma.aslScreeningProject.findFirst({
where: { id: projectId, userId },
});
if (!project) {
throw new Error('Project not found');
}
// 2. 获取该项目的所有文献
const literatures = await prisma.aslLiterature.findMany({
where: { projectId },
});
if (literatures.length === 0) {
throw new Error('No literatures found in project');
}
logger.info('Found literatures for screening', {
projectId,
count: literatures.length
});
// 3. 创建筛选任务
const task = await prisma.aslScreeningTask.create({
data: {
projectId,
taskType: 'title_abstract',
status: 'running',
totalItems: literatures.length,
processedItems: 0,
successItems: 0,
failedItems: 0,
conflictItems: 0,
startedAt: new Date(),
},
});
logger.info('Screening task created', { taskId: task.id });
// 4. 异步处理文献(简化版:直接在这里处理)
// 生产环境应该发送到消息队列
processLiteraturesInBackground(task.id, projectId, literatures);
return task;
} catch (error) {
logger.error('Failed to start screening task', { error, projectId });
throw error;
}
}
/**
* 后台处理文献真实LLM调用
*/
async function processLiteraturesInBackground(
taskId: string,
projectId: string,
literatures: any[]
) {
try {
// 1. 获取项目的PICOS标准
const project = await prisma.aslScreeningProject.findUnique({
where: { id: projectId },
});
if (!project) {
throw new Error('Project not found');
}
// 🔧 修复:字段名映射(数据库格式 → LLM服务格式
const rawPicoCriteria = project.picoCriteria as any;
const picoCriteria = {
P: rawPicoCriteria?.P || rawPicoCriteria?.population || '',
I: rawPicoCriteria?.I || rawPicoCriteria?.intervention || '',
C: rawPicoCriteria?.C || rawPicoCriteria?.comparison || '',
O: rawPicoCriteria?.O || rawPicoCriteria?.outcome || '',
S: rawPicoCriteria?.S || rawPicoCriteria?.studyDesign || '',
};
const inclusionCriteria = project.inclusionCriteria || '';
const exclusionCriteria = project.exclusionCriteria || '';
const screeningConfig = project.screeningConfig as any;
// 🔧 修复:模型名映射(前端格式 → API格式
const MODEL_NAME_MAP: Record<string, string> = {
'DeepSeek-V3': 'deepseek-chat',
'Qwen-Max': 'qwen-max',
'GPT-4o': 'gpt-4o',
'Claude-4.5': 'claude-sonnet-4.5',
'deepseek-chat': 'deepseek-chat', // 兼容直接使用API名
'qwen-max': 'qwen-max',
'gpt-4o': 'gpt-4o',
'claude-sonnet-4.5': 'claude-sonnet-4.5',
};
const rawModels = screeningConfig?.models || ['deepseek-chat', 'qwen-max'];
const models = rawModels.map((m: string) => MODEL_NAME_MAP[m] || m);
logger.info('Starting real LLM screening', {
taskId,
projectId,
totalLiteratures: literatures.length,
models,
});
// 🔍 调试:输出关键信息到控制台
console.log('\n🚀 开始真实LLM筛选:');
console.log(' 任务ID:', taskId);
console.log(' 项目ID:', projectId);
console.log(' 文献数:', literatures.length);
console.log(' 模型(映射后):', models);
console.log(' PICOS-P:', picoCriteria.P?.substring(0, 50) || '(空)');
console.log(' PICOS-I:', picoCriteria.I?.substring(0, 50) || '(空)');
console.log(' PICOS-C:', picoCriteria.C?.substring(0, 50) || '(空)');
console.log(' 纳入标准:', inclusionCriteria?.substring(0, 50) || '(空)');
console.log(' 排除标准:', exclusionCriteria?.substring(0, 50) || '(空)');
console.log('');
let processedCount = 0;
let successCount = 0;
let conflictCount = 0;
// 2. 逐篇处理文献串行处理避免API限流
for (const literature of literatures) {
try {
// 🔧 验证:必须有标题和摘要
if (!literature.title || !literature.abstract) {
logger.warn('Skipping literature without title or abstract', {
literatureId: literature.id,
hasTitle: !!literature.title,
hasAbstract: !!literature.abstract,
});
console.log(`⚠️ 跳过文献 ${processedCount + 1}: 缺少标题或摘要`);
processedCount++;
continue;
}
logger.info('Processing literature', {
literatureId: literature.id,
title: literature.title?.substring(0, 50) + '...',
});
// 3. 调用真实的双模型筛选
const screeningResult = await llmScreeningService.dualModelScreening(
literature.id,
literature.title,
literature.abstract,
picoCriteria as any, // 已做映射,类型安全
inclusionCriteria,
exclusionCriteria,
[models[0], models[1]],
screeningConfig?.style || 'standard',
literature.authors,
literature.journal,
literature.publicationYear
);
// 4. 映射结果到数据库格式
const dbResult = {
projectId,
literatureId: literature.id,
// DeepSeek结果
dsModelName: screeningResult.deepseekModel,
dsPJudgment: screeningResult.deepseek.judgment.P,
dsIJudgment: screeningResult.deepseek.judgment.I,
dsCJudgment: screeningResult.deepseek.judgment.C,
dsSJudgment: screeningResult.deepseek.judgment.S,
dsConclusion: screeningResult.deepseek.conclusion,
dsConfidence: screeningResult.deepseek.confidence,
dsPEvidence: screeningResult.deepseek.evidence.P,
dsIEvidence: screeningResult.deepseek.evidence.I,
dsCEvidence: screeningResult.deepseek.evidence.C,
dsSEvidence: screeningResult.deepseek.evidence.S,
dsReason: screeningResult.deepseek.reason,
// Qwen结果
qwenModelName: screeningResult.qwenModel,
qwenPJudgment: screeningResult.qwen.judgment.P,
qwenIJudgment: screeningResult.qwen.judgment.I,
qwenCJudgment: screeningResult.qwen.judgment.C,
qwenSJudgment: screeningResult.qwen.judgment.S,
qwenConclusion: screeningResult.qwen.conclusion,
qwenConfidence: screeningResult.qwen.confidence,
qwenPEvidence: screeningResult.qwen.evidence.P,
qwenIEvidence: screeningResult.qwen.evidence.I,
qwenCEvidence: screeningResult.qwen.evidence.C,
qwenSEvidence: screeningResult.qwen.evidence.S,
qwenReason: screeningResult.qwen.reason,
// 冲突状态
conflictStatus: screeningResult.hasConflict ? 'conflict' : 'none',
...(screeningResult.conflictFields ? { conflictFields: screeningResult.conflictFields } : {}),
// 最终决策
finalDecision: screeningResult.finalDecision === 'pending' ? null : screeningResult.finalDecision,
// AI处理状态
aiProcessingStatus: 'completed',
aiProcessedAt: new Date(),
// 可追溯信息
promptVersion: 'v1.0.0-mvp',
rawOutput: JSON.parse(JSON.stringify({
deepseek: screeningResult.deepseek,
qwen: screeningResult.qwen,
})),
};
// 5. 保存结果到数据库
await prisma.aslScreeningResult.create({
data: dbResult,
});
successCount++;
if (screeningResult.hasConflict) {
conflictCount++;
}
logger.info('Literature processed successfully', {
literatureId: literature.id,
dsConclusion: screeningResult.deepseek.conclusion,
qwenConclusion: screeningResult.qwen.conclusion,
hasConflict: screeningResult.hasConflict,
});
// 🔍 调试:成功处理
console.log(`✅ 文献 ${processedCount+1}/${literatures.length} 处理成功`);
console.log(' DS:', screeningResult.deepseek.conclusion, '/', 'Qwen:', screeningResult.qwen.conclusion);
console.log(' 冲突:', screeningResult.hasConflict ? '是' : '否');
} catch (error) {
logger.error('Failed to process literature', {
literatureId: literature.id,
error: error instanceof Error ? error.message : 'Unknown error',
stack: error instanceof Error ? error.stack : undefined,
});
// 🔍 调试:输出到控制台
console.error('\n❌ 文献处理失败:');
console.error(' 文献ID:', literature.id);
console.error(' 标题:', literature.title?.substring(0, 60));
console.error(' 错误:', error);
console.error('');
// 继续处理下一篇文献
}
processedCount++;
// 6. 更新任务进度每1条更新一次保证前端能及时看到进度
await prisma.aslScreeningTask.update({
where: { id: taskId },
data: {
processedItems: processedCount,
successItems: successCount,
conflictItems: conflictCount,
failedItems: processedCount - successCount,
},
});
if (processedCount % 5 === 0 || processedCount === literatures.length) {
logger.info('Task progress updated', {
taskId,
progress: `${processedCount}/${literatures.length}`,
success: successCount,
conflicts: conflictCount,
});
}
}
// 7. 标记任务完成
await prisma.aslScreeningTask.update({
where: { id: taskId },
data: {
status: 'completed',
processedItems: literatures.length,
successItems: successCount,
conflictItems: conflictCount,
failedItems: literatures.length - successCount,
completedAt: new Date(),
},
});
logger.info('Screening task completed', {
taskId,
total: literatures.length,
success: successCount,
conflicts: conflictCount,
failed: literatures.length - successCount,
});
} catch (error) {
logger.error('Background processing failed', { taskId, error });
// 标记任务失败
await prisma.aslScreeningTask.update({
where: { id: taskId },
data: {
status: 'failed',
errorMessage: error instanceof Error ? error.message : 'Unknown error',
},
});
}
}
// 已移除 mockAIScreening 函数,现在使用真实的 LLM 调用
// 如果需要测试模式,请在环境变量中设置 USE_MOCK_AI=true

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@@ -121,3 +121,7 @@ export interface BatchReviewDto {